Previous Chapter: 4 Summer-Fall Habitat Action
Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

5

Overarching Issues

This chapter considers cross-cutting issues arising from the Committee’s analyses of Shasta coldwater pool management, Old and Middle River (OMR) flow management, and the Summer-Fall Habitat Action (SFHA). These issues include the needs to (1) enhance collaborative science to improve the pace and effectiveness of Bay-Delta watershed science to inform management efforts; (2) improve the modeling enterprise, with a focus on integrating water management, hydrodynamic, water quality, and ecological models; and (3) continue incorporating climate change into long-term operations.

THE SCIENCE ENTERPRISE AND THE BAY-DELTA WATERSHED

As discussed in Chapter 1, the overall enterprise of science and technical support for California water management (especially for the Bay-Delta watershed) is extensive. This enterprise employs more than 1,000 professionals with a total budget of more than $100 million per year,1 with people and money distributed across more than a dozen agencies and research organizations. Adding to the complexity, these government agencies often contract work out to consulting firms. California’s many universities are also deeply involved in aspects of water-related research. This distributed scientific and technical workforce both reflects and reinforces the fragmentation of authority and missions across a wide range of agencies at local, state, and federal levels. Yet, the operational success of these organizations requires shared access to quality information and science.

The following discussion provides the Committee’s recommendations for ways to sustain and improve shared scientific efforts for management of the Bay-Delta watershed. Although the discussion offers a specific suggestion—the creation of a science hub—the most important point is simple, irrespective of whether or not agencies pursue the science hub concept. Shared science efforts are crucially important to each agency’s individual missions and the overall effectiveness of the community of water project and regulatory agencies. Maintaining and enhancing shared scientific and technical efforts should be a management and strategic science priority.

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1See https://www.deltacouncil.ca.gov/pdf/dpiic/meeting-materials/2024-10-28-fy-2022-2023-delta-crosscut-budget-report.pdf.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

The Need for and Challenges of Coordinated Science

The idea that management of complex environmental systems should draw on collaborative science is not new. Terms such as team science, interdisciplinary research, transdisciplinary research, convergence research, and collaborative science are often used to describe collective efforts to tackle complex scientific or societal problems (Hall et al., 2012; Lyall and Fletcher, 2013; Stokols et al., 2013). Such efforts emphasize the importance of collaboration across disciplines, institutions, and sectors to tackle problems that are too intricate for any single field or entity to resolve.

Collaborative approaches often improve the relevance and usability of science for decision making, particularly for problems involving conflicts (Cash et al., 2003; Kirchhoff et al., 2013). Similarly, interdisciplinary research teams can better address complex problems by integrating diverse perspectives and expertise, thus creating solutions that are both scientifically robust and socially relevant (Hall et al., 2012; Stokols et al., 2013). Strengthening interagency and cross-disciplinary collaborations enhances the ability to translate scientific knowledge into practical solutions in a timely and defensible way, creating more effective bridges between science and policy and across stakeholders.

Despite these benefits, coordinating scientific efforts and bringing that science to managers is challenging. That challenge exists partly because some fragmentation across agencies and programs is necessary. In some cases, science in agencies is focused on mission-specific priorities, and in other cases questions require interactions among disciplines and across agencies and other interested parties. If everything science-related happened through coordinated, interdisciplinary, multi-agency initiatives, hardly anything could get done. In a system as complex as the Bay-Delta watershed, the ideal of holistic decision making is unattainable; no person can know, and no model can address, or even consider, every important facet of the system. Fragmentation also sometimes enables innovation; groups independently working on similar problems often introduce fresh ideas. Fragmented management also can be easier to budget, because it reduces the “transaction costs” of sharing funds or personnel across agencies and can clarify the assignment of responsibilities and accountability. Contracting work out to consultants may sometimes save money and can bring in distinctive expertise not immediately available within agencies, and contracting can sometimes expedite the process. For these reasons, the pressures toward fragmentation are constant—and in some ways valuable.

But fragmentation also can create problems when scientists and system operators are drawing on different assumptions, bodies of information, and models or versions of models while trying to manage the same system. That can easily lead to situations where different managers and regulators talk past each other, act at cross-purposes, or make mistakes that other entities’ knowledge or collaboration could have helped avoid.

Coordinated Science and the Bay-Delta Watershed

The need for shared knowledge and for advancing scientific and technical understanding of the Central Valley’s water problems remains pressing. A warming climate, more extreme events, and invasive species are changing underlying conditions for ecosystems, water supply, and flood control. Traditional monitoring is growing in expense while new monitoring techniques are expanding the range of information and insights available but require coordinating expertise, instrumentation, and planning to realize these benefits and control costs. Political dysphoria has increased skepticism of facts and science, making it both more difficult and more valuable to develop common understandings.

The value of collaborative, coordinated, and science-informed decision making has long been recognized in California. Agencies responsible for managing California water have taken important actions grounded in that recognition. For the Bay-Delta and its watershed, several organizations are already important in supporting collaborative science—including the U.S. Geological Survey (USGS), the Delta Science Program, the San Francisco Estuary Institute (SFEI), the California Water and Environmental Modeling Forum (CWEMF), and the Interagency Ecological Program (IEP). Box 5-1 summarizes some key achievements of these entities.

In the Committee’s view, efforts such as those listed in Box 5-1 are crucial and should be expanded. These efforts could be bolstered by creating a centralized organization with a broad mandate, as described herein—the

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
BOX 5-1
Selected Examples of the Outcomes of Collaborative Science in California
Pelagic Organism Decline.

The IEP led one of the first synthesis activities linking experts, data, and information from across agencies and other entities to identify the primary causes of the dramatic reduction in several fish species in the upper estuary of San Francisco Bay and the Delta (Sommer et al., 2007). The IEP provides a forum to generate and integrate ecological information for management of the San Francisco Bay-Delta ecosystem and the water that flows through it. The IEP has been providing monitoring data and scientific information for more than 60 years (Herrgesell, 2012).

The Baylands Goals Project.a

This comprehensive project was coordinated by the California Coastal Conservancy and the SFEI in 2015. Comprehensive restoration goals for the San Francisco Bay estuary were produced by a collaborative of 21 management agencies working with a multi-disciplinary team of more than 100 scientists.

Delta Science Fellows Program.b

This program administered by the California Sea Grant Program and Delta Science Program is an example of an initiative that builds links between academia, community partners, and agencies. This competitive program provides funding for early career researchers to work with academic, community, and agency mentors. Awards are given to those research questions that contribute to solving priority management issues and informing decision making.

State of Bay-Delta Science Reports.c

Since 2013, the Delta Science Program has convened multiple experts across the science enterprise spectrum to generate periodic updates of the state of the science in the Bay-Delta and its watershed with findings published in the open access San Francisco Estuary & Watershed Science journal.

Water Temperature Modeling Platform (WTMP).

As discussed in Chapter 2, the U.S. Bureau of Reclamation (USBR) has invested considerable resources and staff to develop the WTMP with an objective of building a diverse community of experts around a suite of models that is easily accessible. The WTMP has been the subject of rigorous peer review and is expected to be launched to interested experts in fall 2025.

Training Workshops for CalSim3 and Other Central Valley Project (CVP) and State Water Project (SWP) Models.

Among many current efforts directly related to CVP and SWP is that the California Department of Water Resources (CDWR) and USBR have worked with CWEMF to offer training sessions in CalSim3 and to build a virtual community of experts beyond CDWR and USBR.d

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a See https://www.sfei.org/projects/baylands-ecosystem-habitat-goals-project.

b See https://caseagrant.ucsd.edu/funding/2025-delta-science-fellowship.

c See https://sbds.deltacouncil.ca.gov.

d See https://cwemf.org/wp/services/workshops/.

Committee uses the term the Bay-Delta Watershed Science Hub, or just the Hub. Its work should encompass the Delta and its watershed as well as relevant interconnections to San Francisco Bay. Such centralized science organizations have been broadly useful to all entities involved, with several examples listed below.

  1. Southern California Coastal Water Research Project2
  2. National Center for Ecological Analysis and Synthesis3

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2See https://www.sccwrp.org.

3See https://www.nceas.ucsb.edu.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
  1. Delta Science Program4
  2. USGS John Wesley Powell Center for Analysis and Synthesis5
  3. Chesapeake Bay Program Office6 and the companion Chesapeake Research Consortium7
  4. California Water Data Consortium8
  5. SFEI9
  6. University of California Collaboratory for Equity in Water Allocation (COEQWAL) project10
  7. U.S. Bureau of Reclamation (USBR) and California Department of Water Resources (CDWR) collaboration on the CalSim model

The scientific research that supports and stimulates more informed management is complex and crosses agency boundaries, with different agencies emphasizing different aspects of issues. Even when consensus exists on the underlying science, less consensus exists on priorities and approaches that guide decision making (Luoma et al., 2015). This tension is reflected in two recurring critiques of the science enterprise: (1) science is often underutilized in policy and management, in part because of inadequate science communication; and (2) management entities struggle to employ scientific knowledge in developing timely, relevant, and actionable solutions.

A Bay-Delta Watershed Science Hub

This discussion of a Bay-Delta Watershed Science Hub is an exploration—not a detailed blueprint. A feasibility study, as proposed below, could flesh out the conceptual framework or at least provide a forum for major project and regulatory agencies to discuss their common science needs. The Committee envisions the Hub as a coordinating entity for shared science and technical efforts supporting multiple agencies. Its work could include the following:

  1. Developing and sustaining coordinated monitoring to address specific topics, fundamental conditions, or long-term trends; developing and maintaining common multi-agency data sets; and performing synthesis of existing knowledge and data
  2. Developing and maintaining modeling capabilities (e.g., expanding joint CVP-SWP operations modeling to include ecosystems, developing a common water accounting framework for the Central Valley, and applying machine learning) needed by multiple agencies and programs
  3. Reviewing existing models and structured model comparisons to enhance the algorithms and data used; improve estimates of risk and uncertainty; and better integrate physical, biogeochemical, and life-cycle models
  4. Coordinating multi-agency studies and technical consensus efforts on broadly important scientific questions
  5. Developing and vetting ambitious new ideas, such as enhancing migration of species or inhibiting salinity intrusion through altered flow patterns and timing of tidal flows across the Delta
  6. Offering joint training for models, data analysis and mining, artificial intelligence, visualization, monitoring technologies, and other activities that support agency needs and professional development for staff working in the system
  7. Recruiting and educating the next generation of scientists and engineers through opportunities provided by the Delta Science Fellows program and other agency-academia partnership programs
  8. Supporting and strengthening current long-term scientific and technical planning initiatives, such as the Delta Science Plan

Regarding 2 and 3 above, there is a temptation to build the most complicated models to represent complex systems. Such modeling has high cost in time and funding and can lead to over-fitting and over-confidence in mod-

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4See https://deltacouncil.ca.gov/delta-science-program/.

5See https://www.usgs.gov/centers/john-wesley-powell-center-for-analysis-and-synthesis.

6See https://www.chesapeakebay.net.

7See https://chesapeake.org.

8See https://cawaterdata.org.

9See https://www.sfei.org.

10See https://live-coeqwal-ca.pantheon.berkeley.edu.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

eling results and over-dependence on these expensive models for new and changing problems. Conversely, simpler models are quicker and cheaper to develop, more easily understood (in terms of strengths and weaknesses), and could provide better simulations beyond the training data. The Hub organization, with the engagement of capable experts, could help guide the right balance between simplicity and complexity in model selection and development, as well as identification and prioritization of modeling improvements. This could improve the transparency and robustness of decision making that uses models.

Many of the activities listed above are done independently by individual organizations. The community of agencies (and their missions) would benefit from more collaborative activities across the board. The various modeling groups are primarily focused on the objectives of a single agency or department within an agency. There is little time or direction for these experienced modelers to interact with other agencies or even across programs within the same organization particularly when planning or developing innovations or the next generation of a model or method (refer to section on Siloing). The Hub could provide a forum and resources for key individuals to engage across boundaries through mechanisms such as dedicated Sea Grant Fellows and postdoctoral researchers to work within modeling teams, enhanced communications such as collaborative online communication tools, and CWEMF or other in-person activities. Some activities likely to reap the largest benefits from coordination across institutions include routine syntheses of existing data and research; identifying and testing new monitoring approaches; stewardship of existing models and identifying and supporting new modeling initiatives; and planning and executing integrated scientific studies that could include field, laboratory, and modeling initiatives focusing on major confounding issues such as those highlighted in Chapters 24.

A small core staff, which might include a program manager and technical staff, could manage the Hub. The technical staff would have skills in areas such as data science and modeling and would be able to work with experts across the Bay-Delta watershed on key issues such as model interoperability or new monitoring approaches. Some staff could be assigned on a project basis, either full-time or part-time, from contributing organizations (including agencies, tribes, nongovernmental organizations [NGOs], consultants, and academia). Specific project leadership would be identified by agencies or entities with particular interest in the action(s) that will be informed by the science or study outcome.

The Hub would need a physical location and a virtual presence, a modest funding base to support these assets and staff, and access to computational resources (e.g., by agreement with agencies and/or universities). Specific project activities coordinated by the Hub could access funding from additional sources, such as agencies, research programs, foundations, the private sector, and other entities. Projects could be funded as directed research or through a competitive grant process with clear articulation of the contribution to management actions. This process could be facilitated through existing avenues such as the Delta Science Program and California Sea Grant but would need more involvement from other major projects and regulatory agencies.

The Hub’s priorities could be developed from the Delta Science Plan (which includes the watershed and connections to the Bay), previous work by the Coordinated Science and Adaptive Management Program, the Sacramento River Science Partnership, agency/tribal priorities, and other sources. The Hub would also have flexibility to coordinate and mobilize scientific activities in response to episodic events such as an earthquake, unanticipated levee break, contaminant spill, or a newly identified invasive species determined to significantly influence the ecosystem and Project operations. An effective governance structure is critical if the concept of a Hub, however it is constituted, is to be successful.

Feasibility Study

The Committee recommends a multi-agency feasibility study to explore improvements to the management of science for water and ecosystems in the Central Valley, including specifically the concept of a Hub. The feasibility study should consider earlier assessments and concepts and describe the following:

  1. The basic organizational structure of the Hub: What, Why, How, and Who.
  2. A governance structure to ensure that the Hub is agency-led and enhances the in-house agency expertise and mission of agencies. Careful consideration should be given to a governance structure that ensures the
Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

    primary users of the science (including the State Water Resources Control Board, CDWR, and USBR) receive the information they need, develop shared scientific knowledge, and support complementary collaborative tools. The Delta Science Program is widely respected for facilitating, coordinating, reviewing, and working across agency and interest boundaries to identify common science priorities. However, this role does not currently extend to having responsibility to coordinate or implement a comprehensive interagency science program. Similarly, effective engagement with California’s academic institutions should also be explored within this feasibility assessment.

  1. How priority activities would be selected and governed (expanding from the efforts of the Delta Plan Interagency Implementation Committee and the Delta Science Plan).
  2. The (a) staffing, (b) how experts would be engaged (particularly those representing underserved communities, tribes, NGOs, academia, and groups with limited resources), (c) how computational resources would be accessed, (d) how data would be accessed and managed from different repositories, and (e) the tools and expertise that would be available to investigative teams.
  3. A base budget for sustaining the Hub, and source of base funding support.
  4. Additional funding mechanisms for supporting specific projects.
  5. How problems to be addressed would be selected, scoped, prioritized, and implemented.
  6. How this entity would ensure meaningful engagement of experts from interested parties, and how results are communicated.
  7. Performance metrics, review process, and renewal cycle.
  8. A potential charter, which would also examine any need for legislative establishment.

A well-scoped feasibility study of the Hub concept would provide agency leaders and policymakers with a pragmatic, structured framework to evaluate this opportunity. A feasibility study could be completed in less than 12 months, and the approach could be piloted by pursuing two or three demonstration problems with a timeline, adequate funding and other resources, and clearly specified deliverables. This approach would allow the concept to evolve, building on what has worked. The science hub is not a new concept, and the feasibility study could build on past ideas and include a review of other frameworks and their effectiveness, successes, and failures—including assessments done by the National Center for Ecological Analysis and Synthesis, the National Socio-Environmental Synthesis Center, the Southern California Coastal Water Research Project, and the John Wesley Powell Center for Analysis and Synthesis.

MODELING

California water management draws upon a broad array of numerical models, and the Committee is impressed with the quality and sophistication of the agencies’ modeling work. Nevertheless, the models have been developed by different agencies and different groups within agencies, academia, and other organizations. Some models have been repurposed for uses other than those for which they originally were developed, and some models were originally developed when computational science was less advanced. Most models have their origins in periods when California’s climate, water management issues and technologies, and water demands were significantly different than they are today or will be in the future. All of these limitations suggest that better integration of new data into models (rather than reliance on the historic record), better integration among models, development of new models that can outperform their predecessors, and better management of the modeling enterprise as a whole are key to better linkage of scientific knowledge and management decisions.

Computer modeling of aquatic systems and water management for the Central Valley has developed since the 1970s to be among the best in the world. Yet, the Central Valley and its modeling enterprise face new challenges from the diversification and intensification of water demands including higher evaporative demand; competition between native species that have adapted to a historical climate and non-native species, some of which are better adapted to current conditions; and the targeted end of groundwater overdraft by 2040, which currently supports a large proportion of water use. The following sections specifically discuss higher-level issues with CalSim applicable to all three actions reviewed in the previous chapters (and other actions).

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

Issues with CalSim

CalSim (and its predecessor DWRSIM) was designed to develop and compare alternative infrastructure designs for expanding the SWP, because building statewide infrastructure was the principal mission of CDWR at that time. CalSim is foundational for much of the Bay-Delta modeling and remains useful for many purposes, but it can be a misfit for other purposes, such as ecosystem management.

Time Step

When CalSim was first developed, computational limitations made a monthly model a reasonable compromise between temporal resolution, accuracy, and computability. However, in the past 35 years, the power of modern computers, software, and storage have exploded. But even with these improvements, major CalSim model runs, because of their more detailed spatial and institutional representation, are slower than their predecessors. Interest is growing in modeling ever finer-scale operations, which include OMR operations in the Delta, fish habitat, environmental and ecosystem performance indicators, coldwater pool management, flood risk management and operations, and hydropower operations and benefits. Simple or statistical disaggregation of results from monthly to daily values, or finer, is now used. For some purposes, this use is reasonable. However, there could also be value in reducing the main time step of CalSim to reduce temporal extrapolations (as discussed below and in Rose et al., 2024).

The monthly time scale resolution of CalSim3 is too coarse for representing biological effects, which occur over much smaller time scales to capture diurnal and other processes. Not surprisingly, a reduction of the simulation time step for CalSim without prohibitively increasing the computation time has been a topic of discussion among CalSim users. The smallest model time step should be determined by the appropriate transport time scale,11 which appears to be the advection time of water parcels to the Delta, estimated at about five to eight days. A reduction of time scale will help reduce errors introduced by the large impedance encountered due to mismatch of time scales when downscaling flow variables from monthly to daily or hourly values. Conversely, Delta Simulation Model II (DSM2) solves the shallow water equations for which the computational time steps is determined by the Courant and Wave Resolution Factor criteria. Currently, DSM2 uses 15-minute time steps with inputs provided at a commensurate time scale. Sridharan et al. (2018) argued that this time step may not satisfy the above criteria for numerical consistency. Where modeling must couple processes at large and smaller time scales, three approaches are available: disaggregate large time step results into smaller time steps (by simple averaging or statistical methods), use empirical models (such as artificial neural networks [ANNs] in CalSim to fit short-term compliance to longer simulation steps), or explicitly model on the smaller time steps. A modeling strategy would consider (and perhaps use) all three of these approaches.

Although daily models are used for some large water system operations models (e.g., New York City), a weekly CalSim model would suffice if followed by reasonable disaggregation methods for finer time periods (by simple or statistical disaggregation or explicit nesting of long and short time step process-based or empirical models). However, such methods cannot be used for transient (dynamic) calculations such as those required for pulsed flows and sudden barrier closures, for which dynamic models such as DSM2 need to be used.

The types of hydrologic information needed for relevant biological models that utilize CalSim output directly

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11This is the time scale where a perturbation in the Delta is felt systemwide and flow is adjusted accordingly. This is the minimum time step that the model could run capturing the changes within. The model time step should be determined by the processes that need to be resolved: (1) For DSM2 that solves the cross-sectionally averaged Saint–Venant equations for shallow flows, the time step ought to satisfy the Courant–Freidrichs–Lewy criterion so that disturbances are contained within a grid during one time step. Because disturbances satisfy the shallow-water disturbance speed c ~ g h ~ 10 m/s, h being the averaged fluid depth (h = 10 m; Sridharan et al., 2018), within 15 minutes the disturbances cover a good distance within the Delta ~ 10 km (compared to 1.0–1.5 km grid size used). Hence, we recommend a reduction of the time step for DSM2,which is the same recommendation as Sridharan et al. (2018). A reduction of grid sizes is also recommended, say to ~300m, considering that nonhydrodynamic disturbances (e.g., salinity) travel at lower speeds ~ 0.3–0.5 m/s. (2) For CalSim3, which does not depend on shallow water theory, this time step would be the advection time of a water parcel moving through the Delta, ~ 200 km/(0.3–0.5 m/s) ~ 5–8 days. (The average speed was estimated using Ramón et al., 2018.) Therefore, the CalSim3 time step could be reduced significantly to a week or so.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

or derivatives of CalSim simulations include peak winter flows, spring recession peak and duration, fall pulse duration and peak, ramping rates, and accurate minimum instream flows within reaches (CEFWG, 2021; Poff et al., 1997; Yarnell et al., 2015). These are examples of hydrologic output that cannot currently be generated from CalSim’s monthly average inflow. Reducing the CalSim time step would help encompass these metrics.

Moving to a weekly time step version of CalSim may seem major, but it need not happen all at once. This will require more detailed data sets including hydrologic inflows, and reformulation of the operational description of some parts of the system. Different approaches to providing finer time step results for ecological and flood management purposes could be explored.

Transparency

CalSim3 is an important planning tool, although there is much room for improvement. Although CalSim3 has been reasonably well documented (CDWR and USBR, 2002), some details on its usage and inner workings need better transparency—a difficult chore given the many agencies, consultants, model developers, and researchers that have provided upgrades for CalSim3. In addition, resources to train modelers across the wide swath of CalSim3 operations and continuous training of a new generation of CalSim3 modelers should be a priority. The CWEMF/CDWR efforts to run training sessions for CalSim3 for the modeling community are steps in the right direction.

Additional Processes

In recent years, higher-resolution hydrodynamic models and innovations in particle tracking have provided greater insight into many ecological processes. Examples include the work of Holleman et al. (2022), who combined telemetry of tagged hatchery fish with a high-resolution hydrodynamic model to quantify the range of swimming behavior of emigrating salmon smolts at a tidal junction. They found that smolts moved through the area more slowly than the mean flow velocity, which may have important implications for flow management in the Delta. Similarly, movement behavior for Delta smelt was investigated using behavior movement models that included high-resolution hydrodynamics and population models by Korman et al. (2021) to explore proportion entrainment loss. They found that behavioral rules based on concepts such as tidal surfing, movement toward more turbid water, or movement toward less saline water did not, on their own, explain the temporal and spatial variability in trawl catches or the temporal variation in salvage. Similar types of analyses that seek to understand species movement in response to management action using high-resolution hydrodynamic models have examined longfin smelt (Kimmerer and Gross, 2022) and the movement of copepods (Hassrick et al., 2023). Numerical experiments using high-resolution coupled models to test actions can reveal insights about local processes or short-term effects that are not captured in ecological models driven with DSM2 outputs. Such three-dimensional water flow, water quality, and ecological modeling capability can also expand the horizons of Delta management actions to include modifications of tidal flows in the Delta to support biological productivity and transport of food and organisms to desirable locations, and reduce movement of native species into unsuitable parts of the Delta.

Both CalSim3 and DSM2 lack turbidity and sediment transport capabilities that could enhance their use in OMR flow management. This deficiency precludes calculations pertinent to turbidity bridge avoidance, requiring use of measured turbidities at specific locations for OMR management. Scour is another major issue at some flow junctions (divergence regions), and sediment transport models coupled with hydrodynamic models such as DSM2-HYDRO or DSM2-PTM could simulate when excessive scour could harm fish (Bowen et al., 2009). Delta sediment/bed erosion models have been in development over past decades: for example, DSM2-General Transport Model for real-time operations and long short-term memory ANN suitable for CalSim3-based planning (Abrishamchi and Nam, 2019; Kim et al., 2022). Their operational or planning use awaits further developments. To this end, development of parsimonious models such as ANN salinity-flow relationships in CalSim3 would be useful.

CalSim’s origin as an operation planning model for the SWP and CVP has hindered its ability to represent the coordinated operations of many local resources and decisions within the larger California water system. The model misses much of the more sophisticated water banking, market, and exchange decisions made locally and regionally to integrate a broader portfolio of local, regional, and groundwater supplies, and many water demand

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

management activities are largely absent from state and federal modeling. These local and regional decisions are increasingly relied on statewide and greatly reduce the costs of shortages, droughts, Sustainable Groundwater Management Act compliance, and climate adaptation.

Siloing

Developing and upgrading models in an operational setting with many participants and stakeholders is difficult. There is a high degree of inertia in advancing modeling for the Bay-Delta system. Some of this inertia is because of the convenience of using models (and monitoring networks) already accepted and more usable in one’s agency or program (because of staffing, accessibility, ease of internal communication, or agency missions). Some is perhaps due to the fear, expense, or risks of an agency having to master an additional model or modify existing models for additional missions outside their normal operations. Furthermore, creating new monitoring to support new models can be expensive. This can be compounded by separation, within agencies, between model developers, system operators, and decision makers. All of these factors can lead to institutional modeling “silos” that provide comfort and expertise within individual agencies. However, such “silos” of modeling also impede communications, collaboration, and the development of common explorations and understandings of problems and solutions, which increasingly span several state and federal agencies. Modeling should help to bring together agencies and interests for common understanding, knowledge, and perhaps trust, both among agencies and across the entire stakeholder community. However, modeling currently often reinforces separation of agencies (and programs within agencies) and creates barriers to common analyses, discussions, and knowledge. The proposed Hub could help break down these silos and lead in the coordinated development and strategic application of models (new or existing) to controversial problems involving multiple agencies.

WATER MANAGEMENT IN A CHANGING CLIMATE

Each of the previous three chapters has discussed how various climate impact drivers (CIDs) will affect the three actions reviewed by the Committee. This section provides an overview of the CIDs, reiterates their effects on the actions, and recommends ways to improve the integration of climate-related impacts into modeling and project operations and planning. CDWR and USBR have adopted two different approaches. Increased coordination and a detailed comparison of these approaches would offer additional insights about uncertainties and avoid confusion or conflicting planning decisions resulting from divergent methodologies and predictions.

CIDs are defined as physical conditions of the climate system—such as average states, events, or extremes—that affect human or natural systems (IPCC, 2021). The eight drivers considered by the Committee are described below, along with their relevance to the three actions. This information is also summarized in Table 5-1, which includes three rankings (A, B, or C) that reflect whether the impact is direct or indirect, whether observed changes are statistically significant, whether there is consensus among models on projected changes, and whether the impact is positive or negative. Furthermore, because changes in CIDs can involve different characteristics—such as magnitude, intensity, frequency, duration, or timing—Table 5-1 specifies which characteristic is relevant for each driver. For example, streamflow changes refer specifically to shifts in the timing of streamflow, not its magnitude. For additional information on observed and projected changes associated with these CIDs, see Appendix A and Chapters 2, 3, and 4.

Annual Precipitation

Annual precipitation in this context refers to the long-term average of total yearly precipitation, typically calculated over a 30-year period or longer. Changes in annual precipitation are considered in terms of magnitude only. Observations indicate that California’s annual precipitation has decreased over the period 2002–2021 compared to the long-term average; however, future projections are highly uncertain, with models suggesting either a slight increase or decrease in annual precipitation (see Appendix A). The rankings in Table 5-1 are based on recent decreasing trends (2002-2021) in annual precipitation and their potential impacts on the three CVP actions.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

TABLE 5-1 CIDs and Their Influence on the Long-Term Operation of the Three CVP Actions

Climatic Impact Driver Shasta Coldwater Pool Management Old and Middle River Flow Management Summer-Fall Habitat Action
Annual Precipitation

(Magnitude)
B B B
Annual and Seasonal Temperature

(Magnitude)
C C C
Snowpack

(Magnitude, Timing)
C
Sea Level Risea

(Magnitude)
A B
Streamflow

(Timing)
B B B
Heatwaves

(Magnitude, Frequency, Intensity)
B B B
Droughts

(Frequency, Intensity, Duration)
C C C
Extreme Precipitation

(Intensity, Frequency)
A A
Wildfire

(Frequency and Magnitude)
A
 
Symbol Importance Definition
A Moderate or Uncertain CIDs that have an indirect impact on the action; unlike the other two categories, the impact can either be negative or positive.
B Important CIDs that have a direct impact on the action but are not statistically significant or their direct effects are less significant for management decisions.
C Critical CIDs that have a direct negative impact on the action and there is sufficient evidence of statistically significant change in their characteristics (e.g., magnitude, intensity, duration, frequency).

NOTES: Each driver is characterized by changes in magnitude, intensity, frequency, duration, or timing, but only certain aspects are considered here (indicated in parentheses). Blank cells indicate drivers not considered to have a direct or substantial impact on a given action.

a Sea level rise effects are not considered to be an important factor until after 2050.

Annual and Seasonal Temperature

Annual and seasonal temperatures in this context refer to long-term average air temperatures, calculated over a 30-year period or more. Only changes in magnitude are considered. Both observational data and model temperature projections show an upward trend across California (see Appendix A, Figure A-10). Table 5-1 shows that, along with drought, this CID is critical for all three actions, mainly due to the impacts of higher water temperatures on fish health. Rising temperatures alone could jeopardize the existence of wild coldwater species in the Delta and the Central Valley (Brown et al., 2016).

Snowpack

Changes in snowpack involve both decreases in snow depth and snow water equivalent (magnitude), as well as shifts in the timing of peak snowpack and snowmelt events (timing), both of which are discussed in detail in Appendix A. A decrease in snowpack is a critical CID only for the Shasta Coldwater Pool Management Action due to its impacts on formation and maintenance of the coldwater pool.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

Sea Level Rise

Only changes in the magnitude of sea level rise, and not timing, were considered in evaluating the impact of this CID to the three CVP actions. According to OPC (2024), by the year 2100 sea levels in California may rise by 1 to 6.6 feet (0.3 to 2.0 meters) depending on emissions levels. Continued sea level rise is only expected to be important for the SFHA due to the eastward shift of the low-salinity zone such that it no longer overlaps with Suisun Marsh and Suisun Bay. OMR flow management might also be affected if sea level rise and associated salinity increases mean that pumping rates would have to be decreased in order to prevent salinity intrusion into the Delta. Both effects are anticipated to only be important over very long time frames (after 2050).

Streamflow

Although streamflow can change in volume (magnitude) or frequency, this discussion (and the Table 5-1 entries) focuses specifically on changes in timing—that is, consistent shifts toward earlier or later peak flows. There is growing evidence that timing shifts are most pronounced in snow-dependent regions, including parts of California (see Appendix A). As discussed in Chapter 2, shifts in the timing of streamflow could affect the development of the coldwater pool at Shasta, and it could also affect fish health in the upper Sacramento and San Joaquin rivers and the Delta by altering the timing of spawning cues for fish.

Heatwaves

A heatwave is a period of unusually high temperatures, defined relative to a local or historical threshold, lasting from several days to weeks. Changes in heatwaves may include higher peak temperatures during events (magnitude), more events per year (frequency), and longer-lasting heatwaves (duration). Table 5-1 addresses all three of these aspects, which are projected to increase in the future (see Appendix A). Common indices used to characterize heatwaves include the annual maximum of daily maximum temperature and the number of days exceeding a defined threshold. This area of study is emerging, with new analyses showing significant increases in the frequency and duration of both air and water temperature heatwaves in the Bay-Delta region, although the trends may become even clearer with longer-term data sets and further research (Mahardja et al., 2025). Heatwaves are expected to have wide-ranging implications for ecological and human health in the region and to affect all three actions reviewed in this report, so understanding their effects remains a developing scientific priority.

Droughts

Changes in droughts include increased intensity (greater water deficits), longer duration, and greater frequency, which are typically driven by both reduced precipitation and increased evapotranspiration. As Table 5-1 shows, all three actions could be critically affected by drought, from the action being suspended (SFHA), to the inability to develop a sufficient volume of cold water at Shasta Reservoir, to growing inaccuracies in the estimation of evapotranspiration that plays a role in OMR flow management.

Extreme Precipitation

Extreme precipitation refers to short-duration events of unusually high rainfall or snowfall. Changes in extreme precipitation may be more intense individual events (intensity), more frequent occurrences (frequency), and longer or more persistent events (duration) or those that cover a more extensive area. Here, the discussion focuses on the first two types of changes.

In California, climate model projections indicate a likely increase in the intensity of precipitation, even in regions where total annual precipitation may remain stable or decline (see Appendix A). Table 5-1 outlines the potential impacts of changes in extreme precipitation on the CVP actions. While these extreme high-precipitation events could be disruptive to many aspects of the entire system, whether they will positively or negatively affect the three actions is unclear.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

Wildfires

Wildfires are unplanned fires that burn natural vegetation. Along with forest management practices and increased human activity, wildfire occurrence is influenced by multiple climatic and environmental factors, including temperature, precipitation, humidity, wind, and vegetation amount and dryness. Changes in wildfire activity include more frequent fire events (frequency) and larger areas burned (extent or magnitude), among many others. In California, observational data show increased frequency and extent of wildfires in recent decades, driven by such climate factors as higher temperatures, reduced snowpack, earlier spring onset, and prolonged dry periods (see Appendix A). Table 5-1 shows that the implications of increased wildfire activity are most relevant to Shasta coldwater pool management, but the exact impacts have not yet been well studied.

***

BOX 5-2
California Department of Water Resources Climate Modeling for SWP Operations

CDWR’s climate planning for the SWP is primarily carried out through two efforts—the Delivery Capability Report (CDWR, 2024) and the SWP Climate Adaptation Plan. The latter effort, to be released in 2025, will outline how innovative and planned strategies can influence future water deliveries and mitigate the risk of reductions in average annual supply, considering a range of future climate conditions that include analysis of more extreme precipitation and droughts. In the 2024 update to the Delivery Capability Report, CDWR has taken a new approach to generating climate scenarios. Previous reports relied on a single future scenario to estimate SWP delivery capability, representing a central tendency of climate impacts. This approach was deemed insufficient for capturing the full range of uncertainties associated with climate change. Developing multiple scenarios provides a broader understanding of potential risks and enables planning that aligns with varying user risk tolerances and objectives. The 2024 update utilizes a range of climate scenarios but holds operations and infrastructure constant. CDWR plans to align the scenarios developed in this report with other state efforts to account for climate change.a

Future conditions for temperature, precipitation, and sea level rise are characterized by their “Level of Concern,” or the “percent of model-informed climate outcomes that would result in better system performance” (Schwarz, 2024). Conditions with “more challenging outcomes” are higher concern and conditions with “less challenging outcomes” are lower concern. Figure 5-1 below illustrates the three scenarios—a 95th, 75th, and 50th percentile Level of Concern. These scenarios include projections for sea level rise, average annual temperature, average annual precipitation, and extreme precipitation events. Projections extend to 2085.

Climate scenarios for the Delivery Capability Report.
FIGURE 5-1 Climate scenarios for the Delivery Capability Report.
SOURCE: Schwarz (2024).

a This paragraph was edited after release of the report to clarify the goals of the SWP Climate Adaptation Plan.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

Recent efforts to incorporate climate change into long-term operational planning and modeling for the CVP and SWP emphasize the importance of adapting water resource management to account for shifting hydrological patterns, rising temperatures, and increased variability in precipitation. According to the Delta Stewardship Council’s modeling report (2024), climate change scenarios are integrated into hydrological models such as CalSim and the Variable Infiltration Capacity (VIC) model to project future water availability and demand. Other models, such as DSM2, have been updated to include projections for sea level rise and upstream hydrological changes, thus enabling simulation of water quality, flow dynamics, and salinity intrusion for a range of climate scenarios. The Delta Stewardship Council’s Fish and Aquatic Effects Analysis report (Rose et al., 2024) reviews the USBR efforts to integrate climate projections into ecological models to evaluate the effectiveness of operational strategies aimed at mitigating these impacts, such as adjusting flow releases or improving habitat connectivity.

CDWR and USBR are incorporating climate change modeling efforts into their respective operational frameworks for long-term operations. CDWR’s approach, detailed in the 2024 Delivery Capability Report (CDWR, 2024) and described in more detail in Box 5-2, uses multiple climate scenarios to capture uncertainties in future impacts.

The scenario development process involves five key steps:

1. System Stress Test.

CDWR stress-tested the SWP using historical and simulated hydrological data from a weather generator with the goal to simulate SWP operations over a range of climate conditions—from warming 0 to 5°C and from -25 to 25 percent change in average annual precipitation, resulting in 26 different simulations. This stress test was performed on the Sacramento Soil Moisture Accounting model and the CalLite model. The outputs of these simulations enable CDWR to select which performance metric was most appropriate to use for a larger modeling effort. The Eight River Index April-to-July flowa was selected as the most representative metric for modeling.

2. Climate Model Output.

Climate model projections for precipitation and temperature were obtained from 15 GCMs available from the most recent release of global GCM output, the Coupled Model Intercomparison Project Phase 6 (CMIP6). Of the available set of climate scenarios that characterize future emissions and global development pathways, CDWR utilized Shared Socioeconomic Pathway (SSP) 2-4.5 (Middle of the Road), SSP3-7.0 (Regional Rivalry) and SSP5-8.5 (Fossil-Fueled Development) (IPCC, 2021).

Because GCM output from CMIP6 is available at a spatial resolution too coarse for modeling and analysis within California, CDWR used the 3-kilometer (km) downscaled LOCA2 data set, which is specific to the California domain. LOCA2 employs a hybrid downscaling approach that combines statistical methods with output from dynamically downscaled GCM-Weather Research Forecasting runs, which are bias corrected to ERA5 reanalysis data (Pierce et al., 2023). Using gridded GCM outputs from LOCA2, CDWR averaged daily temperature (minimum and maximum) and daily precipitation outputs to monthly for the entire period of record (1950–2100) and then aggregated spatially to the 20 major watersheds within the CalSim3 domain. Monthly precipitation and temperature values for each watershed were then averaged to the entire CalSim3 domain, using two approaches: an area-weighted and flow-weighted average. The flow-weighted average was ultimately used.

The final step in climate output processing was to estimate change factors, or changes in millimeters per year (mm/yr) or degrees, from the 30-year baseline climate period (1992–2021) to the future climate period (2028–2057, the future 30-year climate period centered at 2043). From these change factors (based on each GCM/SSP combination), a bivariate probability density function was fit and a 100,000-member sample was drawn. From this information, the percentile “Levels of Concern” were established. The 50th, 75th, and 95th percentiles provided a meaningful spread in the Eight River Index April-to-July values and would sufficiently stress the system.

3. Weather Generator Climate Inputs.

CDWR employed a weather generator approach to create gridded daily meteorological conditions for each Level of Concern scenario that would be fed into the VIC hydrological model. The weather generator was designed to generate conditions by incrementally adjusting temperature and precipitation. It does this by applying step changes to the baseline daily maximum and minimum temperature data uniformly across the entire spatial domain. This means that the climate conditions used for the Delivery Capability Report analysis were grounded in historical weather patterns but have altered temperature and precipitation characteristics that represent plausible long-term climate change.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
4. Hydrologic Modeling.

The weather generator outputs, as well as baseline historical conditions, were fed into the VIC model. A change factor was calculated by taking the difference between VIC outputs for each weather generator time series and the baseline conditions. These change factors were then applied to CalSim3 inputs. CalSim3 is then run under these climate-adjusted input time series.

5. Incorporation of Sea Level Rise.

CalSim3 uses an ANN to generate sea level rise data that are inputs to the model. CDWR aligned a sea level rise scenario to each Level of Concern based on existing ANNs used for CalSim3. Ultimately, a 0.98-ft sea level rise (for the 75th and 95th percentile Level of Concern) and a 0.49-ft sea level rise (for the 50th percentile Level of Concern) were used.

__________________

a The Eight River Index includes flows from (1) Sacramento River at Bend Bridge, (2) Feather River inflow to Lake Oroville, (3) Yuba River at Smartville, (4) American River inflow to Folsom Lake, (5) Stanislaus River inflow to New Melones Lake, (6) Tuolumne River inflow to New Don Pedro Reservoir, (7) Merced River inflow to Lake McClure, and (8) San Joaquin River inflow to Millerton Lake.

This approach includes system stress testing with historical and simulated hydrological data, downscaled climate projections from 15 global climate models (GCMs), and the integration of sea level rise scenarios into CalSim3 using ANNs. USBR employs a cascading modeling approach for long-term operational planning, beginning with emission scenario selection and progressing through climate simulations, spatial downscaling, hydrologic modeling, and operational assessments. Results from these analyses drive hydrodynamic models to assess circulation, salinity, and water quality and habitat impacts, ensuring that USBR’s long-term planning accounts for both global trends and regional hydrological challenges. USBR’s approach is further detailed in Box 5-3.

While both agencies aim to incorporate robust climate modeling into operations, differences in their approaches—such as CDWR’s emphasis on percentile-based stress testing and USBR’s cascading framework—may lead to divergent methods in practice. Therefore, efforts to either integrate their approaches or share findings will be challenging for the two agencies. In addition, CDWR’s Delivery Capability Report scenarios assume that infrastructure and operations will remain static, which may limit the adaptability of its models to future changes in system capacity or certain management strategies. These scenarios also assume that channel bottom elevations in the Delta remain fixed—implying ongoing, extensive dredging—and that no islands in the Delta will flood. USBR’s 20-year planning horizon for long-term operations is a reasonable time frame but may not account for all long-term variability or extreme events projected beyond this period. Finally, modeling is not currently considering the impacts of multiple combined CIDs, such as extreme heat coupled with drought, even though these events can occur simultaneously or sequentially.12

Benefits would be realized from closer coordination between CDWR and USBR to develop shared standards and protocols for modeling climate change impacts on the CVP and SWP. Moreover, regularly updating their respective modeling protocols to ensure alignment with current best practices in climate impact assessment is warranted. This work might include, for example, following the approach used in the Intergovernmental Panel on Climate Change’s sixth assessment report (IPCC, 2021) of evaluating projections based on global warming levels rather than fixed future time periods. This approach can help to reduce uncertainty tied to climate sensitivity in CMIP6 models—often referred to as the “hot models” problem (Hausfather et al., 2022). Finally, given the evidence of more frequent compound events (multiple extreme events occurring simultaneously) and cascading events (extreme events occurring in sequence; AghaKouchak et al., 2020), there is a need for more detailed modeling studies to assess how such events may affect the Projects and specifically the three CVP actions reviewed

___________________

12This paragraph was edited after release of the report to clarify climate modeling approaches.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
BOX 5-3
USBR Approach to Long-Term Operations Climate Change Modeling

The USBR long-term operations climate change modeling follows a cascade approach with the following stages (USBR, 2021):

  1. Selection of an Emission Scenario.For example, the SSPs are a set of climate change scenarios that project how global society, economics, and demographics could change by the end of the 21st century. These scenarios dictate the level of greenhouse gas emissions in the future, which in turn affect the projected level of warming.
  2. Climate Simulations.The emission scenarios from stage (1) are used along with a set of GCMs such as those associated with the CMIP6. The models provide projections of key physical variables, including but not limited to temperature, precipitation, humidity, and sea level.
  3. Spatial Downscaling.The outputs of climate models in stage (2) typically have a coarse spatial resolution (approximately 100 km). Therefore, for climate change impact studies, a downscaling approach is often used to transform the outputs of climate models to a finer spatial resolution. USBR utilizes a combination of statistical, dynamical, and hybrid approaches to achieve this resolution.
  4. Hydrologic Models.Following spatial downscaling, the outputs of key variables such as precipitation and temperature are used as inputs to hydrologic models, which in turn provide simulations of streamflow at different streams and reaches. These simulations are crucial for operation and management decisions and can be obtained using different hydrologic models, such as the VIC model and the Sacramento Soil Moisture Accounting model, among many others.
  5. Operations Models.The outputs of the hydrologic models (e.g., streamflow) along with those of the GCMs are used as inputs to operation models such as CalSim3.
  6. Bay-Delta Models.The last stage of the cascading modeling approach involves using localized models at the scale of the Bay-Delta such as the Resource Management Association’s Bay-Delta model, commonly used for hydrodynamic and water quality impacts with CalSim and other models used to generate inflows and other initial and boundary conditions.

here. The proposed Hub could be a vehicle for improved coordination among the management agencies’ long-term operations related to climate trends.

CONCLUSIONS AND RECOMMENDATIONS

This chapter has outlined three overarching issues that if addressed should enable more effective management of the CVP and SWP into the future. Two of them, the limitations of the current Delta modeling enterprise and the need to take into account a variety of CIDs in future operations and planning, derive from the three action chapters. Although a plethora of models is available for Project operations and long-term planning, the modeling enterprise suffers from a lack of integration and coordination among models, as well as disparities in model versioning and use. All research and data also indicate a warming climate, making it more difficult to meet ongoing water demands in the future. Both issues could be addressed by a science hub for the Bay-Delta watershed.

Recommendation 5-1: A formal feasibility study should be undertaken to assess the potential for a science hub for the Bay-Delta and its watershed.

This hub must be fit-for-purpose and grounded in the needs and culture of the science community. It should be designed to develop solutions to problems that are difficult to address within existing agency or academic silos, without interfering with agency mandates or diminishing internal capacity. It should enhance institutional expertise

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

by creating a collaborative environment where new approaches can be developed and tested, where monitoring can be better coordinated, and where cross-agency training can be implemented. It would also facilitate better coordination across the science that supports CVP and SWP activities.

Recommendation 5-2: Finer-scale models are needed for water and ecosystem management in the Delta and its watershed.

In particular CalSim (which is now widely used to evaluate ecosystem impacts) would benefit from a finer time step (perhaps one week) coupled with explicit or empirical disaggregation to still finer ecologically relevant time steps. With such capability, CalSim (or some other model) could then provide systematic hydrologic information for the more fully coupled hydrodynamic and population models needed for ecosystem management. Innovative ecosystem-wide approaches and quantitative life-cycle models could help to identify management actions that can contribute to species recovery. Monitoring should be tailored and managed to provide data at the spatial and temporal scales needed by the models.

Recommendation 5-3: CDWR and USBR should coordinate more closely and develop shared standards and protocols for modeling climate change impacts on the CVP and SWP.

Consistent protocols are essential for minimizing uncertainty in projected climate change impacts, particularly those arising from two sources: future greenhouse gas emission scenarios and model-related uncertainties (e.g., climate sensitivity). Protocols will help to explain differences between projections and avoid confusion among policymakers and the public around different representations of climate change. Moreover, CDWR and USBR should regularly update their modeling protocols to ensure alignment with current best practices in climate impact assessment. Finally, given the increasing evidence of more frequent compound events (multiple extreme events occurring simultaneously) and cascading events (extreme events occurring in sequence), there is a pressing need for more detailed modeling studies to assess how such events may affect the Projects.

REFERENCES

Abrishamchi, A., and K. Nam. 2019. “GTM-SED Sediment Bed Integration.” Chapter 5 in Methodology for Flow and Salinity Estimates in the Sacramento-San Joaquin Delta and Suisun Marsh. 40th Annual Progress Report from the California Department of Water Resources to the State Water Resources Control Board. https://water.ca.gov/-/media/DWR-Website/Web-Pages/Library/Modeling-And-Analysis/Files/Modeling-and-Analysis-PDFs/2019-Annual-Report_a_y19.pdf.

AghaKouchak, A., F. Chiang, L. S. Huning, et al. 2020. “Climate Extremes and Compound Hazards in a Warming World.” Annual Review of Earth and Planetary Sciences 48(1):519–548. https://doi.org/10.1146/annurev-earth-071719-055228.

Bowen, M.D., S. Hiebert, C. Hueth, and V. Maisonneuve. 2009. “Effectiveness of a Non-Physical Fish Barrier at the Divergence of the Old and San Joaquin Rivers (CA).” California Department of Water Resources and U.S. Department of the Interior, Bureau of Reclamation, Sacramento, California. https://www.waterboards.ca.gov/waterrights/water_issues/programs/bay_delta/docs/cmnt091412/sldmwa/bowen_et_al_2009.pdf

Brown, L. R., L. M. Komoroske, R. W. Wagner, et al. 2016. “Coupled Downscaled Climate Models and Ecophysiological Metrics Forecast Habitat Compression for an Endangered Estuarine Fish.” PLoS One 11(1):e0146724. https://doi.org/10.1371/journal.pone.0146724.

Cash, D. W., W. C. Clark, F. Alcock, et al. 2003. “Knowledge Systems for Sustainable Development.” Proceedings of the National Academy of Sciences 100(14):8086–8091. https://doi.org/10.1073/pnas.1231332100.

CDWR and USBR. 2002. Benchmark Studies Assumption. California Department of Water Resources and U.S. Department of the Interior, Bureau of Reclamation, Sacramento, California. May 17.

CDWR (California Department of Water Resources). 2024. Delivery Capability Report. July. https://data.cnra.ca.gov/dataset/a3bb1ddd-624b-4c3d-95e7-2aa6b3bf2b5b/resource/92356681-957a-48ee-97c4-529d25b9dbb2/download/final_dcr2023_v2.pdf.

CEFWG (California Environmental Flows Working Group). 2021. California Environmental Flows Framework Version 1.0. California Water Quality Monitoring Council Technical Report.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

Delta Stewardship Council. 2024. The Delta Plan and 2024 Five-Year Review. Appendix 1A- Best Available Science. https://deltacouncil.ca.gov/delta-plan/.

Hall, K. L., D. Stokols, R. P. Moser, et al. 2012. “The Collaboration Readiness of Transdisciplinary Research Teams and Centers: Findings from the National Cancer Institute’s TREC Year-One Evaluation Study.” American Journal of Preventive Medicine 42(2):117–123. https://doi.org/10.1016/j.amepre.2011.10.011.

Hassrick, J. L., J. Korman, W. J. Kimmerer, E. S. Gross, L. F. Grimaldo, C. Lee, and A. A. Schultz. 2023. “Freshwater Flow Affects Subsidies of a Copepod (Pseudodiaptomus forbesi) to Low-Salinity Food Webs in the Upper San Francisco Estuary.” Estuaries and Coasts 46(2):450–462. https://doi.org/10.1007/s12237-022-01142-1.

Hausfather, Z., K. Marvel, G. A. Schmidt, J. W. Nielsen-Gammon, and M. Zelinka. 2022. “Climate Simulations: Recognize the ‘Hot Model’ Problem.” Nature 605:26–29. https://www.nature.com/articles/d41586-022-01192-2.

Herrgesell, P. L. 2012. A Historical Perspective of the Interagency Ecological Program: Bridging Multi-Agency Studies into Ecological Understanding of the Sacramento-San Joaquin Delta and Estuary for 40 Years. California Department of Fish and Game.

Holleman, R. C., E. S. Gross, M. J. Thomas, A. L. Rypel, and N. A. Fangue. 2022. “Swimming Behavior of Emigrating Chinook Salmon Smolts.” PLoS One 17(3):e0263972. https://doi.org/10.1371/journal.pone.0263972.

IPCC (International Panel on Climate Change). 2021. Climate Change 2021: The Physical Science Basis. Contribution of Working Group I to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change, edited by V. Masson-Delmotte, P. Zhai, A. Pirani, et al. Cambridge, UK and New York: Cambridge University Press. https://doi.org/10.1017/9781009157896.

Kim, H. S., M. He, and P. Sandhu. 2022. “Suspended Sediment Concentration Estimation in the Sacramento-San Joaquin Delta of California Using Long Short-Term Memory Networks.” Hydrological Processes 36 (10):e14694. https://doi.org/10.1002/hyp.14694.

Kimmerer, W., and E. Gross. 2022. “Population Abundance and Diversion Losses in a Threatened Estuarine Pelagic Fish.” Estuaries and Coasts 45(8):2728–2745. https://doi.org/10.1007/s12237-022-01101-w.

Kirchhoff, C. J., M. C. Lemos, and S. Dessai. 2013. “Actionable Knowledge for Environmental Decision Making: Broadening the Usability of Climate Science.” Annual Review of Environment and Resources 38(1):393–414. https://doi.org/10.1146/annurev-environ-022112-112828.

Korman, J., E. S. Gross, and L. F. Grimaldo. 2021. “Statistical Evaluation of Behavior and Population Dynamics Models Predicting Movement and Proportional Entrainment Loss of Adult Delta Smelt in the Sacramento–San Joaquin River Delta.” San Francisco Estuary & Watershed Science 19(1). https://doi.org/10.15447/sfews.2021v19iss1art1.

Luoma, S. N., C. N. Dahm, M. Healey, and J. N. Moore. 2015. “Challenges Facing the Sacramento-San Joaquin Delta: Complex, Chaotic or Simply Cantankerous?” San Francisco Estuary & Watershed Science 13(3). http://dx.doi.org/10.15447/sfews.2015v13iss3art7.

Lyall, C., and I. Fletcher. 2013. “Experiments in Interdisciplinary Capacity-building: The Successes and Challenges of Large-scale Interdisciplinary Investments.” Science and Public Policy 40(1):1-7. https://doi.org/10.1093/scipol/scs113.

Mahardja, B., S. Bashevkin, C. Pien, et al. 2025. “Heatwaves and Rising Temperatures in the Upper San Francisco Estuary: Trends and Impacts on Ecosystems and Humans.” San Francisco Estuary & Watershed Science 23(1). https://doi.org/10.15447/sfews.2025v23iss1art4.

OPC (California Ocean Protection Council). 2024. State of California Sea-Level Rise Guidance: 2024 Update. Sacramento, CA. https://opc.ca.gov/wp-content/uploads/2024/01/SLR-Guidance-DRAFT-Jan-2024-508.pdf.

Pierce, D. W., S. Rahimi, S. Iacobellis, D. R. Cayan, and J. Kalansky. 2023. LOCA2 Training Data. Data Justification Memo for EPC-20-006 Development of Climate Projections for California and Identification of General Use Projections. https://www.energy.ca.gov/sites/default/files/2024-03/01_BiasCorrectioninWRF_and_LOCA2Projections_DataJustificationMemo_Pierce_Adopted_ada.pdf.

Poff, N. J., J. D. Allan, M. B. Bain, J. R. Karr, K. L. Prestegaard, B. D. Richter, R. E. Sparks, and J. C. Stromberg. 1997. “The Natural Flow Regime: A Paradigm for River Conservation and Restoration.” Bioscience 47(13)769–784. https://doi.org/10.2307/1313099.

Ramón, C. L., M. Acosta, and F. J. Rueda. “Hydrodynamic Drivers of Juvenile-Salmon Out-Migration in the Sacramento River: Secondary Circulation.” Journal of Hydraulic Engineering (2018): n. pag. https://doi.org/10.1061/(ASCE)HY.1943-7900.0001484.

Rose, K., H. Jager, N. Monsen, Z. Bai, and E. Howe. 2024. Peer Review of the Fish and Aquatic Effects Analysis for the Long-Term Operations of the Central Valley Project and State Water Project. A report to the Delta Science Program. https://deltacouncil.ca.gov/pdf/science-program/reports/2024-04-23-long-term-operations-fish-and-aquatic-effects-analysis-final-report.pdf.

Schwarz, A. 2024. DWR Approach to Climate Analysis. Presentation to the NASEM Committee at Meeting 4, Davis, CA, August 12, 2024.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.

Sommer, T., C. Armor, R. Baxter, et al. 2007. “The Collapse of Pelagic Fishes in the Upper San Francisco Estuary.” Fisheries 270–277. https://doi.org/10.1577/1548-8446(2007)32[270:TCOPFI]2.0.CO;2.

Sridharan, V. K., S. G. Monismith, O. B. Fringer, and D. A. Fong. 2018. “Evaluation of the Delta Simulation Model-2 in Computing Tidally Driven Flows in the Sacramento-San Joaquin Delta.” San Francisco Estuary & Watershed Science. https://doi.org/10.15447/sfews.2018v16iss2art6.

Stokols, D., S. Misra, R. P. Moser, K. L. Hall, and B. K. Taylor. 2013. “The Ecology of Team Science: Understanding Contextual Influences on Transdisciplinary Collaboration.” American Journal of Preventive Medicine 42(2):97–105. https://doi.org/10.1016/j.amepre.2011.10.013.

USBR (U.S. Bureau of Reclamation). 2021. 2021 WestWide Climate and Hydrology Assessment (Version 1.2): SECURE Water Act Report Technical Report. Washington, DC: U.S. Department of the Interior.

Yarnell, S. M., G. E. Petts, J. C. Schmidt, A. A. Whipple, E. E. Beller, C. N. Dahm, P. Goodwin, and J. H. Viers. 2015. Functional Flows in Modified Riverscapes: Hydrographs, Habitats and Opportunities.” BioScience 65(10):963–972. https://doi.org/10.1093/biosci/biv102.

Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Suggested Citation: "5 Overarching Issues." National Academies of Sciences, Engineering, and Medicine. 2026. Review of the Long-Term Operations of the Central Valley Project and the State Water Project. Washington, DC: The National Academies Press. doi: 10.17226/29130.
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Next Chapter: Appendix A: Northern California Climate, Hydrology, and Geology
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